Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Srp54P14576 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Srp54P14576 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srp54P14576 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Srp54P14576 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.52■□□□□ 0.88
Srp54P14576 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.52■□□□□ 0.88
Srp54P14576 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srp54P14576 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srp54P14576 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.52■□□□□ 0.88
Srp54P14576 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Srp54P14576 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.52■□□□□ 0.87
Srp54P14576 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srp54P14576 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srp54P14576 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srp54P14576 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srp54P14576 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.5■□□□□ 0.87
Srp54P14576 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srp54P14576 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srp54P14576 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srp54P14576 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
Srp54P14576 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srp54P14576 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srp54P14576 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Srp54P14576 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srp54P14576 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srp54P14576 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Srp54P14576 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.49■□□□□ 0.87
Srp54P14576 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srp54P14576 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Srp54P14576 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Srp54P14576 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Srp54P14576 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.49■□□□□ 0.87
Srp54P14576 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Srp54P14576 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Srp54P14576 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Srp54P14576 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.48■□□□□ 0.87
Srp54P14576 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Srp54P14576 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Srp54P14576 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Srp54P14576 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Srp54P14576 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Srp54P14576 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Srp54P14576 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Srp54P14576 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.47■□□□□ 0.87
Srp54P14576 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Srp54P14576 Gm12922-201ENSMUST00000120626 809 ntBASIC20.47■□□□□ 0.87
Srp54P14576 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Srp54P14576 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Srp54P14576 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Srp54P14576 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.46■□□□□ 0.87
Srp54P14576 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Srp54P14576 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.46■□□□□ 0.87
Srp54P14576 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Srp54P14576 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Srp54P14576 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.46■□□□□ 0.87
Srp54P14576 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Srp54P14576 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.45■□□□□ 0.86
Srp54P14576 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Srp54P14576 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.45■□□□□ 0.86
Srp54P14576 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.45■□□□□ 0.86
Srp54P14576 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Srp54P14576 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Srp54P14576 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Srp54P14576 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Srp54P14576 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Srp54P14576 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Srp54P14576 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Srp54P14576 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Srp54P14576 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Srp54P14576 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Srp54P14576 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Srp54P14576 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.43■□□□□ 0.86
Srp54P14576 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.43■□□□□ 0.86
Srp54P14576 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.43■□□□□ 0.86
Srp54P14576 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Srp54P14576 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.43■□□□□ 0.86
Srp54P14576 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Srp54P14576 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Srp54P14576 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Srp54P14576 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Srp54P14576 Gm21956-201ENSMUST00000179946 522 ntBASIC20.42■□□□□ 0.86
Srp54P14576 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Srp54P14576 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srp54P14576 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.41■□□□□ 0.86
Srp54P14576 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Srp54P14576 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srp54P14576 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srp54P14576 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.41■□□□□ 0.86
Srp54P14576 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srp54P14576 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Srp54P14576 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srp54P14576 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srp54P14576 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Srp54P14576 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Srp54P14576 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Srp54P14576 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Srp54P14576 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Srp54P14576 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Srp54P14576 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Srp54P14576 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms