Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04213 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04213 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04213 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04213 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.09■□□□□ 0.81
P04213 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.09■□□□□ 0.81
P04213 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04213 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
P04213 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04213 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.09■□□□□ 0.81
P04213 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04213 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P04213 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04213 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04213 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04213 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P04213 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.08■□□□□ 0.81
P04213 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P04213 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P04213 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.08■□□□□ 0.81
P04213 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.08■□□□□ 0.8
P04213 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
P04213 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P04213 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.07■□□□□ 0.8
P04213 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04213 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04213 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.07■□□□□ 0.8
P04213 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04213 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P04213 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04213 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04213 Gm13238-201ENSMUST00000117655 780 ntBASIC20.06■□□□□ 0.8
P04213 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.06■□□□□ 0.8
P04213 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.06■□□□□ 0.8
P04213 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
P04213 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04213 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
P04213 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04213 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
P04213 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04213 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P04213 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P04213 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.05■□□□□ 0.8
P04213 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P04213 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.05■□□□□ 0.8
P04213 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04213 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04213 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04213 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
P04213 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04213 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P04213 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.05■□□□□ 0.8
P04213 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.04■□□□□ 0.8
P04213 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.04■□□□□ 0.8
P04213 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.04■□□□□ 0.8
P04213 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
P04213 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
P04213 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.04■□□□□ 0.8
P04213 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P04213 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04213 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
P04213 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.03■□□□□ 0.8
P04213 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
P04213 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
P04213 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
P04213 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
P04213 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.03■□□□□ 0.8
P04213 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04213 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P04213 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
P04213 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04213 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04213 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.02■□□□□ 0.8
P04213 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04213 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04213 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
P04213 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
P04213 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.02■□□□□ 0.79
P04213 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04213 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04213 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04213 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04213 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.01■□□□□ 0.79
P04213 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P04213 Gm45444-201ENSMUST00000211394 898 ntBASIC20.01■□□□□ 0.79
P04213 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04213 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04213 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04213 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms