Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfsf12O54907 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfsf12O54907 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf12O54907 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf12O54907 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tnfsf12O54907 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf12O54907 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf12O54907 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf12O54907 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf12O54907 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.09■□□□□ 0.33
Tnfsf12O54907 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf12O54907 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfsf12O54907 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfsf12O54907 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf12O54907 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfsf12O54907 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.08■□□□□ 0.32
Tnfsf12O54907 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tnfsf12O54907 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.07■□□□□ 0.32
Tnfsf12O54907 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfsf12O54907 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf12O54907 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf12O54907 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf12O54907 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfsf12O54907 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.06■□□□□ 0.32
Tnfsf12O54907 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tnfsf12O54907 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.06■□□□□ 0.32
Tnfsf12O54907 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.06■□□□□ 0.32
Tnfsf12O54907 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tnfsf12O54907 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.06■□□□□ 0.32
Tnfsf12O54907 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.05■□□□□ 0.32
Tnfsf12O54907 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf12O54907 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf12O54907 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf12O54907 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf12O54907 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf12O54907 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf12O54907 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfsf12O54907 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf12O54907 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf12O54907 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.04■□□□□ 0.32
Tnfsf12O54907 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.04■□□□□ 0.32
Tnfsf12O54907 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Tnfsf12O54907 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf12O54907 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf12O54907 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf12O54907 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tnfsf12O54907 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfsf12O54907 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tnfsf12O54907 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.03■□□□□ 0.32
Tnfsf12O54907 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfsf12O54907 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsf12O54907 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsf12O54907 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.02■□□□□ 0.32
Tnfsf12O54907 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsf12O54907 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsf12O54907 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsf12O54907 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfsf12O54907 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms