Protein–RNA interactions for Protein: O54774

Ap3d1, AP-3 complex subunit delta-1, mousemouse

Predictions only

Length 1,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3d1O54774 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ap3d1O54774 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ap3d1O54774 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ap3d1O54774 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ap3d1O54774 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ap3d1O54774 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ap3d1O54774 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ap3d1O54774 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ap3d1O54774 Etf1-202ENSMUST00000180351 108 ntBASIC21.37■■□□□ 1.01
Ap3d1O54774 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.37■■□□□ 1.01
Ap3d1O54774 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ap3d1O54774 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.37■■□□□ 1.01
Ap3d1O54774 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ap3d1O54774 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ap3d1O54774 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ap3d1O54774 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ap3d1O54774 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.36■■□□□ 1.01
Ap3d1O54774 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ap3d1O54774 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ap3d1O54774 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ap3d1O54774 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ap3d1O54774 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.35■■□□□ 1.01
Ap3d1O54774 Gm45102-201ENSMUST00000207427 857 ntBASIC21.35■■□□□ 1.01
Ap3d1O54774 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ap3d1O54774 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.34■■□□□ 1.01
Ap3d1O54774 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
Ap3d1O54774 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.34■■□□□ 1.01
Ap3d1O54774 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.34■■□□□ 1.01
Ap3d1O54774 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.34■■□□□ 1.01
Ap3d1O54774 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ap3d1O54774 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ap3d1O54774 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
Ap3d1O54774 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.34■■□□□ 1.01
Ap3d1O54774 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ap3d1O54774 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ap3d1O54774 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.33■■□□□ 1.01
Ap3d1O54774 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ap3d1O54774 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ap3d1O54774 Gm14117-201ENSMUST00000122417 843 ntBASIC21.33■■□□□ 1.01
Ap3d1O54774 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.33■■□□□ 1.01
Ap3d1O54774 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ap3d1O54774 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ap3d1O54774 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ap3d1O54774 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Ap3d1O54774 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ap3d1O54774 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ap3d1O54774 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ap3d1O54774 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.31■■□□□ 1
Ap3d1O54774 Gm7417-201ENSMUST00000192950 473 ntBASIC21.31■■□□□ 1
Ap3d1O54774 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.31■■□□□ 1
Ap3d1O54774 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.31■■□□□ 1
Ap3d1O54774 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ap3d1O54774 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ap3d1O54774 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ap3d1O54774 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ap3d1O54774 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ap3d1O54774 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ap3d1O54774 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ap3d1O54774 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ap3d1O54774 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ap3d1O54774 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ap3d1O54774 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.29■■□□□ 1
Ap3d1O54774 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.29■■□□□ 1
Ap3d1O54774 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ap3d1O54774 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ap3d1O54774 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Ap3d1O54774 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ap3d1O54774 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ap3d1O54774 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ap3d1O54774 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ap3d1O54774 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ap3d1O54774 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ap3d1O54774 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Ap3d1O54774 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ap3d1O54774 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ap3d1O54774 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ap3d1O54774 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ap3d1O54774 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ap3d1O54774 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ap3d1O54774 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Ap3d1O54774 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ap3d1O54774 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ap3d1O54774 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.26■□□□□ 0.99
Ap3d1O54774 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ap3d1O54774 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.26■□□□□ 0.99
Ap3d1O54774 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ap3d1O54774 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ap3d1O54774 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ap3d1O54774 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ap3d1O54774 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ap3d1O54774 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ap3d1O54774 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.25■□□□□ 0.99
Ap3d1O54774 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ap3d1O54774 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ap3d1O54774 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ap3d1O54774 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.24■□□□□ 0.99
Ap3d1O54774 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.24■□□□□ 0.99
Ap3d1O54774 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ap3d1O54774 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.24■□□□□ 0.99
Ap3d1O54774 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms