Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1O35604 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1O35604 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1O35604 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1O35604 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1O35604 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.38■□□□□ 0.85
Npc1O35604 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1O35604 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1O35604 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1O35604 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1O35604 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.38■□□□□ 0.85
Npc1O35604 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.38■□□□□ 0.85
Npc1O35604 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1O35604 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.38■□□□□ 0.85
Npc1O35604 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1O35604 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1O35604 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1O35604 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1O35604 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.37■□□□□ 0.85
Npc1O35604 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Npc1O35604 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1O35604 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Npc1O35604 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Npc1O35604 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Npc1O35604 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.37■□□□□ 0.85
Npc1O35604 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1O35604 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1O35604 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Npc1O35604 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1O35604 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1O35604 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.36■□□□□ 0.85
Npc1O35604 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1O35604 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Npc1O35604 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1O35604 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.35■□□□□ 0.85
Npc1O35604 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1O35604 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Npc1O35604 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Npc1O35604 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1O35604 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1O35604 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Npc1O35604 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1O35604 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Npc1O35604 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1O35604 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Npc1O35604 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Npc1O35604 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1O35604 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1O35604 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1O35604 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1O35604 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.33■□□□□ 0.85
Npc1O35604 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1O35604 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Npc1O35604 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Npc1O35604 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Npc1O35604 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Npc1O35604 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1O35604 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1O35604 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Npc1O35604 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.32■□□□□ 0.84
Npc1O35604 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.32■□□□□ 0.84
Npc1O35604 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.32■□□□□ 0.84
Npc1O35604 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Npc1O35604 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Npc1O35604 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Npc1O35604 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1O35604 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Npc1O35604 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1O35604 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1O35604 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.3■□□□□ 0.84
Npc1O35604 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Npc1O35604 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
Npc1O35604 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.29■□□□□ 0.84
Npc1O35604 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.29■□□□□ 0.84
Npc1O35604 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1O35604 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Npc1O35604 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.29■□□□□ 0.84
Npc1O35604 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Npc1O35604 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1O35604 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.28■□□□□ 0.84
Npc1O35604 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1O35604 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Npc1O35604 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Npc1O35604 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1O35604 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Npc1O35604 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1O35604 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1O35604 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1O35604 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Npc1O35604 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1O35604 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.27■□□□□ 0.84
Npc1O35604 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Npc1O35604 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Npc1O35604 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1O35604 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1O35604 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1O35604 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1O35604 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Npc1O35604 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.26■□□□□ 0.83
Npc1O35604 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms