Protein–RNA interactions for Protein: J3QPK1

Gm21833, Predicted gene, 21833, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21833J3QPK1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm21833J3QPK1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gm21833J3QPK1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm21833J3QPK1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm21833J3QPK1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm21833J3QPK1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gm21833J3QPK1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm21833J3QPK1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm21833J3QPK1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gm21833J3QPK1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm21833J3QPK1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gm21833J3QPK1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm21833J3QPK1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gm21833J3QPK1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm21833J3QPK1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Gm21833J3QPK1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm21833J3QPK1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm21833J3QPK1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.31■□□□□ 0.52
Gm21833J3QPK1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.31■□□□□ 0.52
Gm21833J3QPK1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm21833J3QPK1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm21833J3QPK1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm21833J3QPK1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gm21833J3QPK1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm21833J3QPK1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gm21833J3QPK1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm21833J3QPK1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm21833J3QPK1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.3■□□□□ 0.52
Gm21833J3QPK1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm21833J3QPK1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm21833J3QPK1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm21833J3QPK1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm21833J3QPK1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm21833J3QPK1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gm21833J3QPK1 Gm9806-201ENSMUST00000051080 552 ntBASIC18.29■□□□□ 0.52
Gm21833J3QPK1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm21833J3QPK1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm21833J3QPK1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm21833J3QPK1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gm21833J3QPK1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm21833J3QPK1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21833J3QPK1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.28■□□□□ 0.52
Gm21833J3QPK1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21833J3QPK1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm21833J3QPK1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21833J3QPK1 Scarna2-201ENSMUST00000157560 414 ntBASIC18.28■□□□□ 0.52
Gm21833J3QPK1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21833J3QPK1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm21833J3QPK1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21833J3QPK1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm21833J3QPK1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm21833J3QPK1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm21833J3QPK1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm21833J3QPK1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Gm21833J3QPK1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.27■□□□□ 0.52
Gm21833J3QPK1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Gm21833J3QPK1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm21833J3QPK1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.27■□□□□ 0.51
Gm21833J3QPK1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
Gm21833J3QPK1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm21833J3QPK1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm21833J3QPK1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.26■□□□□ 0.51
Gm21833J3QPK1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Gm16437-201ENSMUST00000025669 507 ntBASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Golph3-202ENSMUST00000226517 2359 ntBASIC18.25■□□□□ 0.51
Gm21833J3QPK1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm21833J3QPK1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21833J3QPK1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Gm21833J3QPK1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21833J3QPK1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21833J3QPK1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm21833J3QPK1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms