Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.56■□□□□ 0.72
9930021J03RikH3BKP8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
9930021J03RikH3BKP8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
9930021J03RikH3BKP8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
9930021J03RikH3BKP8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
9930021J03RikH3BKP8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.56■□□□□ 0.72
9930021J03RikH3BKP8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
9930021J03RikH3BKP8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
9930021J03RikH3BKP8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
9930021J03RikH3BKP8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
9930021J03RikH3BKP8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
9930021J03RikH3BKP8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
9930021J03RikH3BKP8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.55■□□□□ 0.72
9930021J03RikH3BKP8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.55■□□□□ 0.72
9930021J03RikH3BKP8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
9930021J03RikH3BKP8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
9930021J03RikH3BKP8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
9930021J03RikH3BKP8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
9930021J03RikH3BKP8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.54■□□□□ 0.72
9930021J03RikH3BKP8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
9930021J03RikH3BKP8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
9930021J03RikH3BKP8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
9930021J03RikH3BKP8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
9930021J03RikH3BKP8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
9930021J03RikH3BKP8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
9930021J03RikH3BKP8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
9930021J03RikH3BKP8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
9930021J03RikH3BKP8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
9930021J03RikH3BKP8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
9930021J03RikH3BKP8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
9930021J03RikH3BKP8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
9930021J03RikH3BKP8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.51■□□□□ 0.71
9930021J03RikH3BKP8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
9930021J03RikH3BKP8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
9930021J03RikH3BKP8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
9930021J03RikH3BKP8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
9930021J03RikH3BKP8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
9930021J03RikH3BKP8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
9930021J03RikH3BKP8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
9930021J03RikH3BKP8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
9930021J03RikH3BKP8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
9930021J03RikH3BKP8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
9930021J03RikH3BKP8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
9930021J03RikH3BKP8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
9930021J03RikH3BKP8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
9930021J03RikH3BKP8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
9930021J03RikH3BKP8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
9930021J03RikH3BKP8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
9930021J03RikH3BKP8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.49■□□□□ 0.71
9930021J03RikH3BKP8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.49■□□□□ 0.71
9930021J03RikH3BKP8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
9930021J03RikH3BKP8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
9930021J03RikH3BKP8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
9930021J03RikH3BKP8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.48■□□□□ 0.71
9930021J03RikH3BKP8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
9930021J03RikH3BKP8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
9930021J03RikH3BKP8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
9930021J03RikH3BKP8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
9930021J03RikH3BKP8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
9930021J03RikH3BKP8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
9930021J03RikH3BKP8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
9930021J03RikH3BKP8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
9930021J03RikH3BKP8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
9930021J03RikH3BKP8 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.46■□□□□ 0.71
9930021J03RikH3BKP8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
9930021J03RikH3BKP8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
9930021J03RikH3BKP8 Gm7417-201ENSMUST00000192950 473 ntBASIC19.46■□□□□ 0.71
9930021J03RikH3BKP8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.46■□□□□ 0.71
9930021J03RikH3BKP8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
9930021J03RikH3BKP8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
9930021J03RikH3BKP8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
9930021J03RikH3BKP8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
9930021J03RikH3BKP8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
9930021J03RikH3BKP8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
9930021J03RikH3BKP8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
9930021J03RikH3BKP8 Etf1-202ENSMUST00000180351 108 ntBASIC19.44■□□□□ 0.7
9930021J03RikH3BKP8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.44■□□□□ 0.7
9930021J03RikH3BKP8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
9930021J03RikH3BKP8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
9930021J03RikH3BKP8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
9930021J03RikH3BKP8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
9930021J03RikH3BKP8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
9930021J03RikH3BKP8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
9930021J03RikH3BKP8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
9930021J03RikH3BKP8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.42■□□□□ 0.7
9930021J03RikH3BKP8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms