Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ubr4A2AN08 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Ubr4A2AN08 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Ubr4A2AN08 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Gm11847-201ENSMUST00000125165 1119 ntBASIC11.45□□□□□ -0.58
Ubr4A2AN08 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ubr4A2AN08 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ubr4A2AN08 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC11.44□□□□□ -0.58
Ubr4A2AN08 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.43□□□□□ -0.58
Ubr4A2AN08 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ubr4A2AN08 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ubr4A2AN08 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ubr4A2AN08 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ubr4A2AN08 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Ubr4A2AN08 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ubr4A2AN08 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ubr4A2AN08 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ubr4A2AN08 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.42□□□□□ -0.58
Ubr4A2AN08 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.42□□□□□ -0.58
Ubr4A2AN08 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Gm7199-201ENSMUST00000118327 1485 ntBASIC11.42□□□□□ -0.58
Ubr4A2AN08 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ubr4A2AN08 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Gm40848-201ENSMUST00000221998 324 ntBASIC11.41□□□□□ -0.58
Ubr4A2AN08 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.41□□□□□ -0.58
Ubr4A2AN08 Gm9870-201ENSMUST00000063874 645 ntBASIC11.41□□□□□ -0.58
Ubr4A2AN08 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.41□□□□□ -0.58
Ubr4A2AN08 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Gm12441-201ENSMUST00000121806 588 ntBASIC11.41□□□□□ -0.58
Ubr4A2AN08 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubr4A2AN08 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr4A2AN08 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr4A2AN08 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr4A2AN08 Gm6085-201ENSMUST00000182774 1470 ntBASIC11.4□□□□□ -0.58
Ubr4A2AN08 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr4A2AN08 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr4A2AN08 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr4A2AN08 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubr4A2AN08 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubr4A2AN08 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.39□□□□□ -0.59
Ubr4A2AN08 Gm4968-201ENSMUST00000071458 858 ntBASIC11.39□□□□□ -0.59
Ubr4A2AN08 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr4A2AN08 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ubr4A2AN08 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.39□□□□□ -0.59
Ubr4A2AN08 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ubr4A2AN08 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr4A2AN08 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr4A2AN08 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC11.38□□□□□ -0.59
Ubr4A2AN08 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr4A2AN08 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.38□□□□□ -0.59
Ubr4A2AN08 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.38□□□□□ -0.59
Ubr4A2AN08 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ubr4A2AN08 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Ubr4A2AN08 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.38□□□□□ -0.59
Ubr4A2AN08 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ubr4A2AN08 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms