Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcna-ps2A0A140T8V5 Gm5921-201ENSMUST00000075898 882 ntBASIC20.92■□□□□ 0.94
Pcna-ps2A0A140T8V5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcna-ps2A0A140T8V5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcna-ps2A0A140T8V5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcna-ps2A0A140T8V5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcna-ps2A0A140T8V5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcna-ps2A0A140T8V5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcna-ps2A0A140T8V5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcna-ps2A0A140T8V5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcna-ps2A0A140T8V5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcna-ps2A0A140T8V5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcna-ps2A0A140T8V5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Pcna-ps2A0A140T8V5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcna-ps2A0A140T8V5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.89■□□□□ 0.93
Pcna-ps2A0A140T8V5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcna-ps2A0A140T8V5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.89■□□□□ 0.93
Pcna-ps2A0A140T8V5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcna-ps2A0A140T8V5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcna-ps2A0A140T8V5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcna-ps2A0A140T8V5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcna-ps2A0A140T8V5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pcna-ps2A0A140T8V5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcna-ps2A0A140T8V5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.88■□□□□ 0.93
Pcna-ps2A0A140T8V5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcna-ps2A0A140T8V5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcna-ps2A0A140T8V5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcna-ps2A0A140T8V5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcna-ps2A0A140T8V5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcna-ps2A0A140T8V5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Pcna-ps2A0A140T8V5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcna-ps2A0A140T8V5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcna-ps2A0A140T8V5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcna-ps2A0A140T8V5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcna-ps2A0A140T8V5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcna-ps2A0A140T8V5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcna-ps2A0A140T8V5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcna-ps2A0A140T8V5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcna-ps2A0A140T8V5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcna-ps2A0A140T8V5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcna-ps2A0A140T8V5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcna-ps2A0A140T8V5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Gm45444-201ENSMUST00000211394 898 ntBASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcna-ps2A0A140T8V5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcna-ps2A0A140T8V5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcna-ps2A0A140T8V5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcna-ps2A0A140T8V5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcna-ps2A0A140T8V5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcna-ps2A0A140T8V5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcna-ps2A0A140T8V5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcna-ps2A0A140T8V5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
Pcna-ps2A0A140T8V5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcna-ps2A0A140T8V5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcna-ps2A0A140T8V5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcna-ps2A0A140T8V5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcna-ps2A0A140T8V5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcna-ps2A0A140T8V5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcna-ps2A0A140T8V5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcna-ps2A0A140T8V5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcna-ps2A0A140T8V5 Gm13238-201ENSMUST00000117655 780 ntBASIC20.82■□□□□ 0.92
Pcna-ps2A0A140T8V5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcna-ps2A0A140T8V5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.82■□□□□ 0.92
Pcna-ps2A0A140T8V5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcna-ps2A0A140T8V5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcna-ps2A0A140T8V5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcna-ps2A0A140T8V5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcna-ps2A0A140T8V5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcna-ps2A0A140T8V5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcna-ps2A0A140T8V5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcna-ps2A0A140T8V5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcna-ps2A0A140T8V5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcna-ps2A0A140T8V5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcna-ps2A0A140T8V5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcna-ps2A0A140T8V5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcna-ps2A0A140T8V5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcna-ps2A0A140T8V5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcna-ps2A0A140T8V5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms