Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-5A0A140T8M6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.17□□□□□ -0.3
Igkv3-5A0A140T8M6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.17□□□□□ -0.3
Igkv3-5A0A140T8M6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-5A0A140T8M6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-5A0A140T8M6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-5A0A140T8M6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv3-5A0A140T8M6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv3-5A0A140T8M6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv3-5A0A140T8M6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Igkv3-5A0A140T8M6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Igkv3-5A0A140T8M6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Igkv3-5A0A140T8M6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-5A0A140T8M6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.12□□□□□ -0.31
Igkv3-5A0A140T8M6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-5A0A140T8M6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-5A0A140T8M6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Igkv3-5A0A140T8M6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC13.12□□□□□ -0.31
Igkv3-5A0A140T8M6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-5A0A140T8M6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Igkv3-5A0A140T8M6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igkv3-5A0A140T8M6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igkv3-5A0A140T8M6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-5A0A140T8M6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-5A0A140T8M6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-5A0A140T8M6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-5A0A140T8M6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv3-5A0A140T8M6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms