Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.27■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC15.26■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Gm22567-201ENSMUST00000175542 342 ntBASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.23■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trdv2-1A0A0G2JGB9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.18■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.18■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.17■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trdv2-1A0A0G2JGB9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms