Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-4A0A0G2JG37 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-4A0A0G2JG37 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-4A0A0G2JG37 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav9d-4A0A0G2JG37 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Terc-201ENSMUST00000082862 423 ntBASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-4A0A0G2JG37 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav9d-4A0A0G2JG37 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav9d-4A0A0G2JG37 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-4A0A0G2JG37 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-4A0A0G2JG37 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-4A0A0G2JG37 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-4A0A0G2JG37 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-4A0A0G2JG37 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav9d-4A0A0G2JG37 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9d-4A0A0G2JG37 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Trav9d-4A0A0G2JG37 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-4A0A0G2JG37 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav9d-4A0A0G2JG37 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-4A0A0G2JG37 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-4A0A0G2JG37 Mir3960-201ENSMUST00000198213 73 ntBASIC14.21□□□□□ -0.13
Trav9d-4A0A0G2JG37 Gm7432-201ENSMUST00000210343 879 ntBASIC14.21□□□□□ -0.13
Trav9d-4A0A0G2JG37 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav9d-4A0A0G2JG37 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-4A0A0G2JG37 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9d-4A0A0G2JG37 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav9d-4A0A0G2JG37 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9d-4A0A0G2JG37 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9d-4A0A0G2JG37 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.21□□□□□ -0.14
Trav9d-4A0A0G2JG37 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9d-4A0A0G2JG37 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-4A0A0G2JG37 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav9d-4A0A0G2JG37 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav9d-4A0A0G2JG37 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav9d-4A0A0G2JG37 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.19□□□□□ -0.14
Trav9d-4A0A0G2JG37 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-4A0A0G2JG37 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-4A0A0G2JG37 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav9d-4A0A0G2JG37 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav9d-4A0A0G2JG37 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms