Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Igkv5-43A0A0B4J1J2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.61■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Igkv5-43A0A0B4J1J2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.58■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Igkv5-43A0A0B4J1J2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Gm12922-201ENSMUST00000120626 809 ntBASIC21.57■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Igkv5-43A0A0B4J1J2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.57■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.55■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.54■■□□□ 1.04
Igkv5-43A0A0B4J1J2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.54■■□□□ 1.04
Igkv5-43A0A0B4J1J2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.54■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Igkv5-43A0A0B4J1J2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.53■■□□□ 1.04
Igkv5-43A0A0B4J1J2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.53■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Igkv5-43A0A0B4J1J2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.52■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Gm9847-201ENSMUST00000052528 599 ntBASIC21.52■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
Igkv5-43A0A0B4J1J2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Igkv5-43A0A0B4J1J2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.5■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Igkv5-43A0A0B4J1J2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.49■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gm21956-201ENSMUST00000179946 522 ntBASIC21.49■■□□□ 1.03
Igkv5-43A0A0B4J1J2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.49■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gm9870-201ENSMUST00000063874 645 ntBASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Gm13241-201ENSMUST00000094493 780 ntBASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.47■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Golgb1-201ENSMUST00000023534 498 ntBASIC21.47■■□□□ 1.03
Igkv5-43A0A0B4J1J2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.47■■□□□ 1.03
Igkv5-43A0A0B4J1J2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms