Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv19A0A0B4J1H4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Trbv19A0A0B4J1H4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv19A0A0B4J1H4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv19A0A0B4J1H4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv19A0A0B4J1H4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv19A0A0B4J1H4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv19A0A0B4J1H4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv19A0A0B4J1H4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.77■□□□□ 0.28
Trbv19A0A0B4J1H4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trbv19A0A0B4J1H4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv19A0A0B4J1H4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trbv19A0A0B4J1H4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv19A0A0B4J1H4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv19A0A0B4J1H4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trbv19A0A0B4J1H4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv19A0A0B4J1H4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.75■□□□□ 0.27
Trbv19A0A0B4J1H4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv19A0A0B4J1H4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trbv19A0A0B4J1H4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Trbv19A0A0B4J1H4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv19A0A0B4J1H4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv19A0A0B4J1H4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv19A0A0B4J1H4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv19A0A0B4J1H4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv19A0A0B4J1H4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Trbv19A0A0B4J1H4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv19A0A0B4J1H4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trbv19A0A0B4J1H4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv19A0A0B4J1H4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv19A0A0B4J1H4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv19A0A0B4J1H4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv19A0A0B4J1H4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv19A0A0B4J1H4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv19A0A0B4J1H4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv19A0A0B4J1H4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv19A0A0B4J1H4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv19A0A0B4J1H4 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.72■□□□□ 0.27
Trbv19A0A0B4J1H4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv19A0A0B4J1H4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trbv19A0A0B4J1H4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv19A0A0B4J1H4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv19A0A0B4J1H4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv19A0A0B4J1H4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv19A0A0B4J1H4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv19A0A0B4J1H4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv19A0A0B4J1H4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
Trbv19A0A0B4J1H4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trbv19A0A0B4J1H4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv19A0A0B4J1H4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv19A0A0B4J1H4 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.7■□□□□ 0.26
Trbv19A0A0B4J1H4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv19A0A0B4J1H4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.7■□□□□ 0.26
Trbv19A0A0B4J1H4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbv19A0A0B4J1H4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv19A0A0B4J1H4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv19A0A0B4J1H4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv19A0A0B4J1H4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv19A0A0B4J1H4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv19A0A0B4J1H4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv19A0A0B4J1H4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.69■□□□□ 0.26
Trbv19A0A0B4J1H4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv19A0A0B4J1H4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv19A0A0B4J1H4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv19A0A0B4J1H4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv19A0A0B4J1H4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv19A0A0B4J1H4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv19A0A0B4J1H4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv19A0A0B4J1H4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv19A0A0B4J1H4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv19A0A0B4J1H4 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.67■□□□□ 0.26
Trbv19A0A0B4J1H4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv19A0A0B4J1H4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv19A0A0B4J1H4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trbv19A0A0B4J1H4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trbv19A0A0B4J1H4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv19A0A0B4J1H4 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.67■□□□□ 0.26
Trbv19A0A0B4J1H4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms