Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-47A0A0A6YY41 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-47A0A0A6YY41 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-47A0A0A6YY41 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-47A0A0A6YY41 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-47A0A0A6YY41 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-47A0A0A6YY41 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-47A0A0A6YY41 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-47A0A0A6YY41 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-47A0A0A6YY41 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-47A0A0A6YY41 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.21■□□□□ 0.35
Ighv1-47A0A0A6YY41 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.21■□□□□ 0.35
Ighv1-47A0A0A6YY41 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-47A0A0A6YY41 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Ighv1-47A0A0A6YY41 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-47A0A0A6YY41 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-47A0A0A6YY41 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ighv1-47A0A0A6YY41 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv1-47A0A0A6YY41 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-47A0A0A6YY41 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-47A0A0A6YY41 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-47A0A0A6YY41 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ighv1-47A0A0A6YY41 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.2■□□□□ 0.34
Ighv1-47A0A0A6YY41 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-47A0A0A6YY41 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-47A0A0A6YY41 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.19■□□□□ 0.34
Ighv1-47A0A0A6YY41 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-47A0A0A6YY41 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-47A0A0A6YY41 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-47A0A0A6YY41 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv1-47A0A0A6YY41 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv1-47A0A0A6YY41 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-47A0A0A6YY41 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Ighv1-47A0A0A6YY41 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-47A0A0A6YY41 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-47A0A0A6YY41 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-47A0A0A6YY41 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.17■□□□□ 0.34
Ighv1-47A0A0A6YY41 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-47A0A0A6YY41 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-47A0A0A6YY41 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.15■□□□□ 0.34
Ighv1-47A0A0A6YY41 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-47A0A0A6YY41 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-47A0A0A6YY41 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-47A0A0A6YY41 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-47A0A0A6YY41 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-47A0A0A6YY41 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-47A0A0A6YY41 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-47A0A0A6YY41 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-47A0A0A6YY41 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-47A0A0A6YY41 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.14■□□□□ 0.33
Ighv1-47A0A0A6YY41 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-47A0A0A6YY41 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-47A0A0A6YY41 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv1-47A0A0A6YY41 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv1-47A0A0A6YY41 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-47A0A0A6YY41 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms