Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav21-dv12A0A075B6C4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trav21-dv12A0A075B6C4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav21-dv12A0A075B6C4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav21-dv12A0A075B6C4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav21-dv12A0A075B6C4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav21-dv12A0A075B6C4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav21-dv12A0A075B6C4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav21-dv12A0A075B6C4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav21-dv12A0A075B6C4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav21-dv12A0A075B6C4 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.01■□□□□ 0.15
Trav21-dv12A0A075B6C4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav21-dv12A0A075B6C4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav21-dv12A0A075B6C4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav21-dv12A0A075B6C4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav21-dv12A0A075B6C4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav21-dv12A0A075B6C4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav21-dv12A0A075B6C4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav21-dv12A0A075B6C4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav21-dv12A0A075B6C4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav21-dv12A0A075B6C4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav21-dv12A0A075B6C4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav21-dv12A0A075B6C4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav21-dv12A0A075B6C4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav21-dv12A0A075B6C4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav21-dv12A0A075B6C4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav21-dv12A0A075B6C4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav21-dv12A0A075B6C4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav21-dv12A0A075B6C4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav21-dv12A0A075B6C4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav21-dv12A0A075B6C4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav21-dv12A0A075B6C4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav21-dv12A0A075B6C4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trav21-dv12A0A075B6C4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav21-dv12A0A075B6C4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav21-dv12A0A075B6C4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav21-dv12A0A075B6C4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav21-dv12A0A075B6C4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav21-dv12A0A075B6C4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav21-dv12A0A075B6C4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav21-dv12A0A075B6C4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms