Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Gm16437-201ENSMUST00000025669 507 ntBASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4-4-dv10A0A075B651 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-4-dv10A0A075B651 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.28■□□□□ 0.2
Trav4-4-dv10A0A075B651 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Trav4-4-dv10A0A075B651 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-4-dv10A0A075B651 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-4-dv10A0A075B651 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-4-dv10A0A075B651 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-4-dv10A0A075B651 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-4-dv10A0A075B651 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav4-4-dv10A0A075B651 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Trav4-4-dv10A0A075B651 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4-4-dv10A0A075B651 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4-4-dv10A0A075B651 Gm11687-201ENSMUST00000118911 886 ntBASIC16.27■□□□□ 0.2
Trav4-4-dv10A0A075B651 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4-4-dv10A0A075B651 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4-4-dv10A0A075B651 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4-4-dv10A0A075B651 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav4-4-dv10A0A075B651 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav4-4-dv10A0A075B651 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.27■□□□□ 0.19
Trav4-4-dv10A0A075B651 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-4-dv10A0A075B651 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-4-dv10A0A075B651 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav4-4-dv10A0A075B651 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-4-dv10A0A075B651 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4-4-dv10A0A075B651 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4-4-dv10A0A075B651 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4-4-dv10A0A075B651 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav4-4-dv10A0A075B651 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav4-4-dv10A0A075B651 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Trav4-4-dv10A0A075B651 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4-4-dv10A0A075B651 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav4-4-dv10A0A075B651 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4-4-dv10A0A075B651 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4-4-dv10A0A075B651 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4-4-dv10A0A075B651 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trav4-4-dv10A0A075B651 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav4-4-dv10A0A075B651 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav4-4-dv10A0A075B651 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav4-4-dv10A0A075B651 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 365.2 ms