Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.73■□□□□ 0.59
Ighv1-54A0A075B5W5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Ighv1-54A0A075B5W5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-54A0A075B5W5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-54A0A075B5W5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-54A0A075B5W5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-54A0A075B5W5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-54A0A075B5W5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-54A0A075B5W5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-54A0A075B5W5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-54A0A075B5W5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.71■□□□□ 0.59
Ighv1-54A0A075B5W5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-54A0A075B5W5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-54A0A075B5W5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.71■□□□□ 0.59
Ighv1-54A0A075B5W5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.71■□□□□ 0.59
Ighv1-54A0A075B5W5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-54A0A075B5W5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-54A0A075B5W5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ighv1-54A0A075B5W5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-54A0A075B5W5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-54A0A075B5W5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-54A0A075B5W5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-54A0A075B5W5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-54A0A075B5W5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-54A0A075B5W5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-54A0A075B5W5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ighv1-54A0A075B5W5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-54A0A075B5W5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-54A0A075B5W5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ighv1-54A0A075B5W5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-54A0A075B5W5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-54A0A075B5W5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-54A0A075B5W5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-54A0A075B5W5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-54A0A075B5W5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-54A0A075B5W5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-54A0A075B5W5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-54A0A075B5W5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ighv1-54A0A075B5W5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-54A0A075B5W5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-54A0A075B5W5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-54A0A075B5W5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-54A0A075B5W5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Gm40881-201ENSMUST00000223397 166 ntBASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-54A0A075B5W5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-54A0A075B5W5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-54A0A075B5W5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ighv1-54A0A075B5W5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-54A0A075B5W5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.62■□□□□ 0.57
Ighv1-54A0A075B5W5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-54A0A075B5W5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms