Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.59□□□□□ -0.87
PdfS4R2K0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Gm9794-201ENSMUST00000202370 423 ntBASIC9.59□□□□□ -0.87
PdfS4R2K0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Gm18624-201ENSMUST00000220966 658 ntBASIC9.59□□□□□ -0.87
PdfS4R2K0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
PdfS4R2K0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
PdfS4R2K0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.88
PdfS4R2K0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
PdfS4R2K0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.58□□□□□ -0.88
PdfS4R2K0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.58□□□□□ -0.88
PdfS4R2K0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.58□□□□□ -0.88
PdfS4R2K0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Gm11424-201ENSMUST00000121929 829 ntBASIC9.58□□□□□ -0.88
PdfS4R2K0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.58□□□□□ -0.88
PdfS4R2K0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Gm5745-201ENSMUST00000183748 313 ntBASIC9.58□□□□□ -0.88
PdfS4R2K0 Mir6392-201ENSMUST00000184924 108 ntBASIC9.58□□□□□ -0.88
PdfS4R2K0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
PdfS4R2K0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
PdfS4R2K0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms