Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.14□□□□□ -0.47
Cdh17Q9R100 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.14□□□□□ -0.47
Cdh17Q9R100 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdh17Q9R100 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Gm1335-201ENSMUST00000121653 386 ntBASIC12.13□□□□□ -0.47
Cdh17Q9R100 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdh17Q9R100 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.13□□□□□ -0.47
Cdh17Q9R100 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdh17Q9R100 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.12□□□□□ -0.47
Cdh17Q9R100 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Gm22058-201ENSMUST00000083393 310 ntBASIC12.12□□□□□ -0.47
Cdh17Q9R100 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdh17Q9R100 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdh17Q9R100 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.11□□□□□ -0.47
Cdh17Q9R100 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.11□□□□□ -0.47
Cdh17Q9R100 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh17Q9R100 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh17Q9R100 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh17Q9R100 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.11□□□□□ -0.47
Cdh17Q9R100 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdh17Q9R100 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh17Q9R100 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdh17Q9R100 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms