Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a4Q9QZR9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm12712-201ENSMUST00000120676 801 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm13445-201ENSMUST00000121664 307 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm17214-201ENSMUST00000164501 541 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm23675-201ENSMUST00000157311 125 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a4Q9QZR9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Gm26976-201ENSMUST00000182929 908 ntBASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 398.9 ms