Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm27023-201ENSMUST00000182372 285 ntBASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Gm5370-201ENSMUST00000187187 574 ntBASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Gm18304-201ENSMUST00000189162 546 ntBASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp4bQ9D8B3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Chmp4bQ9D8B3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp4bQ9D8B3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
Chmp4bQ9D8B3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp4bQ9D8B3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.71■□□□□ 0.1
Chmp4bQ9D8B3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Gm9544-201ENSMUST00000223349 2482 ntBASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp4bQ9D8B3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm45011-201ENSMUST00000207620 2297 ntBASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm10434-201ENSMUST00000101158 471 ntBASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm44882-201ENSMUST00000205702 802 ntBASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp4bQ9D8B3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chmp4bQ9D8B3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms