Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clp1Q99LI9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.13□□□□□ -0.31
Clp1Q99LI9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gm26286-201ENSMUST00000104166 134 ntBASIC13.13□□□□□ -0.31
Clp1Q99LI9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gm8199-201ENSMUST00000121323 823 ntBASIC13.13□□□□□ -0.31
Clp1Q99LI9 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Gm9463-201ENSMUST00000206707 601 ntBASIC13.13□□□□□ -0.31
Clp1Q99LI9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.13□□□□□ -0.31
Clp1Q99LI9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Acot6-202ENSMUST00000222921 3622 ntBASIC13.13□□□□□ -0.31
Clp1Q99LI9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.13□□□□□ -0.31
Clp1Q99LI9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clp1Q99LI9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm11509-201ENSMUST00000117358 325 ntBASIC13.12□□□□□ -0.31
Clp1Q99LI9 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.12□□□□□ -0.31
Clp1Q99LI9 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.12□□□□□ -0.31
Clp1Q99LI9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.12□□□□□ -0.31
Clp1Q99LI9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.12□□□□□ -0.31
Clp1Q99LI9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm10288-201ENSMUST00000084614 537 ntBASIC13.12□□□□□ -0.31
Clp1Q99LI9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.12□□□□□ -0.31
Clp1Q99LI9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clp1Q99LI9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms