Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Daam2-202ENSMUST00000224595 1926 ntBASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhgc5Q91XW9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm45118-201ENSMUST00000208928 825 ntBASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhgc5Q91XW9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Gm15782-201ENSMUST00000121073 445 ntBASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhgc5Q91XW9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdhgc5Q91XW9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms