Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Gm44397-201ENSMUST00000195950 113 ntBASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Gm6983-201ENSMUST00000214912 628 ntBASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Pcdh18Q8VHR0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Gm12859-201ENSMUST00000117834 427 ntBASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdh18Q8VHR0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Mir7654-201ENSMUST00000185082 70 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms