Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Zcchc9Q8R1J3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Gm25043-201ENSMUST00000158604 212 ntBASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Gm25700-201ENSMUST00000177693 110 ntBASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Gm38092-201ENSMUST00000195600 653 ntBASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Zcchc9Q8R1J3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Gm7857-201ENSMUST00000117957 358 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Gm12566-201ENSMUST00000121479 359 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Gm45925-201ENSMUST00000218882 744 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Zcchc9Q8R1J3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Matn2-203ENSMUST00000226766 3252 ntBASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.47□□□□□ -0.41
Zcchc9Q8R1J3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms