Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shisa4Q8CA71 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Rprl1-201ENSMUST00000158050 327 ntBASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Gm7593-201ENSMUST00000187246 644 ntBASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shisa4Q8CA71 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Gm14028-201ENSMUST00000117434 479 ntBASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Gm14247-201ENSMUST00000120950 237 ntBASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa4Q8CA71 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa4Q8CA71 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa4Q8CA71 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa4Q8CA71 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa4Q8CA71 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa4Q8CA71 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms