Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Uba3Q8C878 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba3Q8C878 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.12□□□□□ -0.31
Uba3Q8C878 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Uba3Q8C878 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Uba3Q8C878 Gm12314-201ENSMUST00000118104 538 ntBASIC13.12□□□□□ -0.31
Uba3Q8C878 Gm14723-201ENSMUST00000118686 215 ntBASIC13.12□□□□□ -0.31
Uba3Q8C878 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Gm27023-201ENSMUST00000182372 285 ntBASIC13.12□□□□□ -0.31
Uba3Q8C878 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.12□□□□□ -0.31
Uba3Q8C878 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.12□□□□□ -0.31
Uba3Q8C878 Gm43179-201ENSMUST00000198797 275 ntBASIC13.12□□□□□ -0.31
Uba3Q8C878 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.12□□□□□ -0.31
Uba3Q8C878 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Uba3Q8C878 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.12□□□□□ -0.31
Uba3Q8C878 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Uba3Q8C878 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba3Q8C878 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.11□□□□□ -0.31
Uba3Q8C878 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.11□□□□□ -0.31
Uba3Q8C878 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Gm13570-201ENSMUST00000140763 309 ntBASIC13.11□□□□□ -0.31
Uba3Q8C878 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.11□□□□□ -0.31
Uba3Q8C878 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.11□□□□□ -0.31
Uba3Q8C878 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Uba3Q8C878 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba3Q8C878 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms