Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc40Q8BI79 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.08□□□□□ -0.31
Ccdc40Q8BI79 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Ccdc40Q8BI79 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Ccdc40Q8BI79 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.08□□□□□ -0.31
Ccdc40Q8BI79 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc40Q8BI79 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gm23363-201ENSMUST00000175024 79 ntBASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gm29649-201ENSMUST00000185649 419 ntBASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gm7561-201ENSMUST00000211203 886 ntBASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gm6091-201ENSMUST00000098307 165 ntBASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc40Q8BI79 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Gm18262-201ENSMUST00000222560 1946 ntBASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Gm17208-201ENSMUST00000168388 535 ntBASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Gm4768-201ENSMUST00000206199 686 ntBASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc40Q8BI79 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms