Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Gm37489-201ENSMUST00000191883 159 ntBASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Gm18935-201ENSMUST00000212692 664 ntBASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.45□□□□□ -0.42
Rpp38Q80UU2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpp38Q80UU2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Gm15370-201ENSMUST00000117158 253 ntBASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rpp38Q80UU2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Gm24830-201ENSMUST00000102024 166 ntBASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Gm4034-201ENSMUST00000187674 480 ntBASIC12.43□□□□□ -0.42
Rpp38Q80UU2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms