Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm16071-201ENSMUST00000119589 793 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm16459-201ENSMUST00000121443 686 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm17826-201ENSMUST00000189720 798 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 Gm6331-201ENSMUST00000217890 450 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.55□□□□□ -0.72
Rif1Q6PR54 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rif1Q6PR54 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm24891-201ENSMUST00000104391 136 ntBASIC10.54□□□□□ -0.72
Rif1Q6PR54 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm11246-201ENSMUST00000120880 345 ntBASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm43726-201ENSMUST00000199110 775 ntBASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm45094-201ENSMUST00000207013 617 ntBASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.54□□□□□ -0.72
Rif1Q6PR54 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm23596-201ENSMUST00000104304 132 ntBASIC10.54□□□□□ -0.72
Rif1Q6PR54 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.54□□□□□ -0.72
Rif1Q6PR54 AA623943-201ENSMUST00000121794 354 ntBASIC10.54□□□□□ -0.72
Rif1Q6PR54 Gm43962-201ENSMUST00000203898 190 ntBASIC10.54□□□□□ -0.72
Rif1Q6PR54 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
Rif1Q6PR54 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm25766-201ENSMUST00000104101 131 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm11949-201ENSMUST00000117640 372 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms