Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Gm42599-201ENSMUST00000201308 469 ntBASIC11.67□□□□□ -0.54
Sox17Q61473 Gm35960-201ENSMUST00000202712 767 ntBASIC11.67□□□□□ -0.54
Sox17Q61473 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.67□□□□□ -0.54
Sox17Q61473 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.67□□□□□ -0.54
Sox17Q61473 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox17Q61473 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Sox17Q61473 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.67□□□□□ -0.54
Sox17Q61473 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.67□□□□□ -0.54
Sox17Q61473 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox17Q61473 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox17Q61473 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox17Q61473 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.66□□□□□ -0.54
Sox17Q61473 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Sox17Q61473 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox17Q61473 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.66□□□□□ -0.54
Sox17Q61473 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.66□□□□□ -0.54
Sox17Q61473 Gm12341-201ENSMUST00000119724 503 ntBASIC11.66□□□□□ -0.54
Sox17Q61473 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox17Q61473 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.66□□□□□ -0.54
Sox17Q61473 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.66□□□□□ -0.54
Sox17Q61473 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox17Q61473 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox17Q61473 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Sox17Q61473 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox17Q61473 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox17Q61473 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.66□□□□□ -0.54
Sox17Q61473 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sox17Q61473 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Sox17Q61473 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sox17Q61473 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Syt7-204ENSMUST00000223586 1344 ntBASIC11.65□□□□□ -0.54
Sox17Q61473 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sox17Q61473 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sox17Q61473 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sox17Q61473 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.65□□□□□ -0.54
Sox17Q61473 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.65□□□□□ -0.54
Sox17Q61473 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.65□□□□□ -0.54
Sox17Q61473 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Sox17Q61473 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Sox17Q61473 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox17Q61473 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox17Q61473 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms