Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 Gm8756-201ENSMUST00000183250 929 ntBASIC10.84□□□□□ -0.67
Lrrk2Q5S006 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.84□□□□□ -0.67
Lrrk2Q5S006 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.84□□□□□ -0.67
Lrrk2Q5S006 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.84□□□□□ -0.67
Lrrk2Q5S006 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Lrrk2Q5S006 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm43186-201ENSMUST00000198130 824 ntBASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm19587-201ENSMUST00000191395 545 ntBASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm18968-201ENSMUST00000221319 862 ntBASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lrrk2Q5S006 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gm8451-201ENSMUST00000170338 447 ntBASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gm18801-201ENSMUST00000186616 536 ntBASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.82□□□□□ -0.68
Lrrk2Q5S006 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gm7536-201ENSMUST00000077389 444 ntBASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gm5453-201ENSMUST00000080866 447 ntBASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lrrk2Q5S006 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms