Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nphp4P59240 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC16.72■□□□□ 0.27
Nphp4P59240 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Nphp4P59240 Gm37246-201ENSMUST00000192665 835 ntBASIC16.72■□□□□ 0.27
Nphp4P59240 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC16.72■□□□□ 0.27
Nphp4P59240 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC16.72■□□□□ 0.27
Nphp4P59240 Gm5051-201ENSMUST00000204085 485 ntBASIC16.72■□□□□ 0.27
Nphp4P59240 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nphp4P59240 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.72■□□□□ 0.27
Nphp4P59240 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Gm10288-201ENSMUST00000084614 537 ntBASIC16.72■□□□□ 0.27
Nphp4P59240 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Nphp4P59240 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nphp4P59240 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nphp4P59240 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Gm43807-201ENSMUST00000200678 1781 ntBASIC16.72■□□□□ 0.27
Nphp4P59240 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nphp4P59240 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nphp4P59240 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC16.72■□□□□ 0.27
Nphp4P59240 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nphp4P59240 Gm13809-201ENSMUST00000117921 597 ntBASIC16.71■□□□□ 0.27
Nphp4P59240 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC16.71■□□□□ 0.27
Nphp4P59240 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC16.71■□□□□ 0.27
Nphp4P59240 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC16.71■□□□□ 0.27
Nphp4P59240 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nphp4P59240 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Nphp4P59240 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 AC173482.6-201ENSMUST00000225889 1741 ntBASIC16.71■□□□□ 0.27
Nphp4P59240 Gm21998-201ENSMUST00000117552 1308 ntBASIC16.71■□□□□ 0.27
Nphp4P59240 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nphp4P59240 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nphp4P59240 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nphp4P59240 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm6397-201ENSMUST00000161973 1069 ntBASIC16.7■□□□□ 0.26
Nphp4P59240 Gm10774-201ENSMUST00000188689 204 ntBASIC16.7■□□□□ 0.26
Nphp4P59240 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.7■□□□□ 0.26
Nphp4P59240 AC166992.1-201ENSMUST00000216356 565 ntBASIC16.7■□□□□ 0.26
Nphp4P59240 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nphp4P59240 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm7551-201ENSMUST00000089593 1074 ntBASIC16.7■□□□□ 0.26
Nphp4P59240 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nphp4P59240 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC16.7■□□□□ 0.26
Nphp4P59240 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Nphp4P59240 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.7■□□□□ 0.26
Nphp4P59240 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.7■□□□□ 0.26
Nphp4P59240 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Nphp4P59240 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm12579-201ENSMUST00000118040 783 ntBASIC16.7■□□□□ 0.26
Nphp4P59240 Gm15432-201ENSMUST00000121106 195 ntBASIC16.7■□□□□ 0.26
Nphp4P59240 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm9540-201ENSMUST00000188230 478 ntBASIC16.7■□□□□ 0.26
Nphp4P59240 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nphp4P59240 Gm44126-201ENSMUST00000204831 514 ntBASIC16.7■□□□□ 0.26
Nphp4P59240 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms