Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Tpm1P58771 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.9□□□□□ -0.18
Tpm1P58771 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.9□□□□□ -0.18
Tpm1P58771 Gm28693-202ENSMUST00000190758 331 ntBASIC13.9□□□□□ -0.18
Tpm1P58771 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.9□□□□□ -0.18
Tpm1P58771 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Tpm1P58771 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.9□□□□□ -0.18
Tpm1P58771 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
Tpm1P58771 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.9□□□□□ -0.18
Tpm1P58771 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tpm1P58771 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
Tpm1P58771 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tpm1P58771 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.89□□□□□ -0.19
Tpm1P58771 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Tpm1P58771 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.89□□□□□ -0.19
Tpm1P58771 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.89□□□□□ -0.19
Tpm1P58771 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tpm1P58771 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Gm12341-201ENSMUST00000119724 503 ntBASIC13.89□□□□□ -0.19
Tpm1P58771 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Gm6152-201ENSMUST00000151704 340 ntBASIC13.89□□□□□ -0.19
Tpm1P58771 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Tpm1P58771 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Tpm1P58771 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Tpm1P58771 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.89□□□□□ -0.19
Tpm1P58771 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.89□□□□□ -0.19
Tpm1P58771 Gm35960-201ENSMUST00000202712 767 ntBASIC13.89□□□□□ -0.19
Tpm1P58771 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.89□□□□□ -0.19
Tpm1P58771 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.89□□□□□ -0.19
Tpm1P58771 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tpm1P58771 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Tpm1P58771 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tpm1P58771 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tpm1P58771 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.89□□□□□ -0.19
Tpm1P58771 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Tpm1P58771 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.88□□□□□ -0.19
Tpm1P58771 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Tpm1P58771 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Tpm1P58771 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Tpm1P58771 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Gm15429-201ENSMUST00000151268 798 ntBASIC13.88□□□□□ -0.19
Tpm1P58771 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.88□□□□□ -0.19
Tpm1P58771 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.88□□□□□ -0.19
Tpm1P58771 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Tpm1P58771 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.88□□□□□ -0.19
Tpm1P58771 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Tpm1P58771 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.87□□□□□ -0.19
Tpm1P58771 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms