Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.58□□□□□ -0.56
CckbrP56481 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CckbrP56481 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CckbrP56481 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.58□□□□□ -0.56
CckbrP56481 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.58□□□□□ -0.56
CckbrP56481 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CckbrP56481 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.58□□□□□ -0.56
CckbrP56481 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CckbrP56481 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.57□□□□□ -0.56
CckbrP56481 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
CckbrP56481 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CckbrP56481 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
CckbrP56481 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.57□□□□□ -0.56
CckbrP56481 Gm13736-201ENSMUST00000119272 253 ntBASIC11.57□□□□□ -0.56
CckbrP56481 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.57□□□□□ -0.56
CckbrP56481 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.57□□□□□ -0.56
CckbrP56481 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.57□□□□□ -0.56
CckbrP56481 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.57□□□□□ -0.56
CckbrP56481 Gm29396-201ENSMUST00000185659 716 ntBASIC11.57□□□□□ -0.56
CckbrP56481 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Gm38158-201ENSMUST00000194617 339 ntBASIC11.57□□□□□ -0.56
CckbrP56481 Gm7046-201ENSMUST00000221351 977 ntBASIC11.57□□□□□ -0.56
CckbrP56481 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
CckbrP56481 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.57□□□□□ -0.56
CckbrP56481 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CckbrP56481 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.56□□□□□ -0.56
CckbrP56481 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CckbrP56481 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
CckbrP56481 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.56□□□□□ -0.56
CckbrP56481 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CckbrP56481 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.56□□□□□ -0.56
CckbrP56481 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CckbrP56481 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Gm12058-201ENSMUST00000118614 437 ntBASIC11.56□□□□□ -0.56
CckbrP56481 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.56□□□□□ -0.56
CckbrP56481 Gm13316-201ENSMUST00000140537 691 ntBASIC11.56□□□□□ -0.56
CckbrP56481 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.56□□□□□ -0.56
CckbrP56481 Gm27023-201ENSMUST00000182372 285 ntBASIC11.56□□□□□ -0.56
CckbrP56481 Gm43630-201ENSMUST00000201550 776 ntBASIC11.56□□□□□ -0.56
CckbrP56481 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.56□□□□□ -0.56
CckbrP56481 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.56□□□□□ -0.56
CckbrP56481 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Gm9823-201ENSMUST00000051212 327 ntBASIC11.56□□□□□ -0.56
CckbrP56481 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.56□□□□□ -0.56
CckbrP56481 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.56□□□□□ -0.56
CckbrP56481 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CckbrP56481 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.56□□□□□ -0.56
CckbrP56481 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CckbrP56481 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms