Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.92□□□□□ -0.5
Cdkn2bP55271 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.92□□□□□ -0.5
Cdkn2bP55271 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.92□□□□□ -0.5
Cdkn2bP55271 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Gm7029-201ENSMUST00000173226 450 ntBASIC11.92□□□□□ -0.5
Cdkn2bP55271 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Gm4271-201ENSMUST00000174444 973 ntBASIC11.92□□□□□ -0.5
Cdkn2bP55271 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdkn2bP55271 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.91□□□□□ -0.5
Cdkn2bP55271 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Gm11597-201ENSMUST00000121423 964 ntBASIC11.91□□□□□ -0.5
Cdkn2bP55271 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Gm23119-201ENSMUST00000158610 140 ntBASIC11.91□□□□□ -0.5
Cdkn2bP55271 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Gm6244-201ENSMUST00000178732 841 ntBASIC11.91□□□□□ -0.5
Cdkn2bP55271 Gm8515-201ENSMUST00000194852 576 ntBASIC11.91□□□□□ -0.5
Cdkn2bP55271 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdkn2bP55271 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.91□□□□□ -0.5
Cdkn2bP55271 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdkn2bP55271 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.9□□□□□ -0.5
Cdkn2bP55271 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Gm13492-201ENSMUST00000119772 665 ntBASIC11.9□□□□□ -0.5
Cdkn2bP55271 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdkn2bP55271 Gm11918-201ENSMUST00000121660 179 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms