Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Atxn1P54254 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Gm12058-201ENSMUST00000118614 437 ntBASIC12.41□□□□□ -0.42
Atxn1P54254 Gm13045-201ENSMUST00000119019 712 ntBASIC12.41□□□□□ -0.42
Atxn1P54254 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.41□□□□□ -0.42
Atxn1P54254 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.41□□□□□ -0.42
Atxn1P54254 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Atxn1P54254 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Atxn1P54254 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Atxn1P54254 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.41□□□□□ -0.42
Atxn1P54254 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.41□□□□□ -0.42
Atxn1P54254 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.41□□□□□ -0.42
Atxn1P54254 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Gm10312-201ENSMUST00000078515 489 ntBASIC12.41□□□□□ -0.42
Atxn1P54254 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.41□□□□□ -0.42
Atxn1P54254 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.41□□□□□ -0.42
Atxn1P54254 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Atxn1P54254 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Atxn1P54254 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atxn1P54254 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.4□□□□□ -0.42
Atxn1P54254 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.4□□□□□ -0.42
Atxn1P54254 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.4□□□□□ -0.42
Atxn1P54254 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Atxn1P54254 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.4□□□□□ -0.42
Atxn1P54254 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.4□□□□□ -0.42
Atxn1P54254 Gm22121-201ENSMUST00000175148 54 ntBASIC12.4□□□□□ -0.42
Atxn1P54254 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.4□□□□□ -0.42
Atxn1P54254 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.4□□□□□ -0.42
Atxn1P54254 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Atxn1P54254 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Atxn1P54254 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.4□□□□□ -0.42
Atxn1P54254 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atxn1P54254 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Atxn1P54254 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Atxn1P54254 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Atxn1P54254 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Daam2-202ENSMUST00000224595 1926 ntBASIC12.39□□□□□ -0.43
Atxn1P54254 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Atxn1P54254 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.39□□□□□ -0.43
Atxn1P54254 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Atxn1P54254 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.39□□□□□ -0.43
Atxn1P54254 Gm14460-201ENSMUST00000121511 639 ntBASIC12.39□□□□□ -0.43
Atxn1P54254 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.39□□□□□ -0.43
Atxn1P54254 Gm37666-201ENSMUST00000194110 866 ntBASIC12.39□□□□□ -0.43
Atxn1P54254 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Atxn1P54254 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.39□□□□□ -0.43
Atxn1P54254 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.39□□□□□ -0.43
Atxn1P54254 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.39□□□□□ -0.43
Atxn1P54254 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.39□□□□□ -0.43
Atxn1P54254 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atxn1P54254 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms