Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox3P53784 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox3P53784 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox3P53784 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox3P53784 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox3P53784 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox3P53784 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Gm23270-201ENSMUST00000104055 131 ntBASIC11.98□□□□□ -0.49
Sox3P53784 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox3P53784 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.98□□□□□ -0.49
Sox3P53784 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.98□□□□□ -0.49
Sox3P53784 Gm44069-201ENSMUST00000204898 506 ntBASIC11.98□□□□□ -0.49
Sox3P53784 Gm44545-201ENSMUST00000208262 746 ntBASIC11.98□□□□□ -0.49
Sox3P53784 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.98□□□□□ -0.49
Sox3P53784 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sox3P53784 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sox3P53784 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox3P53784 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox3P53784 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox3P53784 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox3P53784 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox3P53784 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.97□□□□□ -0.49
Sox3P53784 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Sox3P53784 Gm23200-201ENSMUST00000104379 132 ntBASIC11.97□□□□□ -0.49
Sox3P53784 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Gm15770-201ENSMUST00000117498 584 ntBASIC11.97□□□□□ -0.49
Sox3P53784 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox3P53784 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox3P53784 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.97□□□□□ -0.49
Sox3P53784 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox3P53784 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox3P53784 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.96□□□□□ -0.49
Sox3P53784 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.96□□□□□ -0.49
Sox3P53784 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Sox3P53784 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox3P53784 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms