Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC8.01□□□□□ -1.13
Xcl1P47993 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Xcl1P47993 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Xcl1P47993 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Xcl1P47993 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC8□□□□□ -1.13
Xcl1P47993 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Gm16198-201ENSMUST00000118766 670 ntBASIC8□□□□□ -1.13
Xcl1P47993 Gm12644-201ENSMUST00000119935 606 ntBASIC8□□□□□ -1.13
Xcl1P47993 Gm12201-201ENSMUST00000120657 1234 ntBASIC8□□□□□ -1.13
Xcl1P47993 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC8□□□□□ -1.13
Xcl1P47993 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Gm4899-201ENSMUST00000178708 719 ntBASIC8□□□□□ -1.13
Xcl1P47993 Gm8495-201ENSMUST00000188740 694 ntBASIC8□□□□□ -1.13
Xcl1P47993 Gm13830-205ENSMUST00000201195 1155 ntBASIC8□□□□□ -1.13
Xcl1P47993 AC153889.1-201ENSMUST00000219257 330 ntBASIC8□□□□□ -1.13
Xcl1P47993 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC8□□□□□ -1.13
Xcl1P47993 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Gm5703-201ENSMUST00000186658 3973 ntBASIC8□□□□□ -1.13
Xcl1P47993 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Gm45089-201ENSMUST00000208082 2040 ntBASIC8□□□□□ -1.13
Xcl1P47993 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Xcl1P47993 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Xcl1P47993 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC7.99□□□□□ -1.13
Xcl1P47993 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Xcl1P47993 Gm19165-201ENSMUST00000204453 1982 ntBASIC7.99□□□□□ -1.13
Xcl1P47993 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms