Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.92□□□□□ -0.66
Upk2P38575 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Upk2P38575 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Upk2P38575 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.92□□□□□ -0.66
Upk2P38575 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Upk2P38575 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.92□□□□□ -0.66
Upk2P38575 Gm22018-201ENSMUST00000104357 131 ntBASIC10.92□□□□□ -0.66
Upk2P38575 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Gm12058-201ENSMUST00000118614 437 ntBASIC10.92□□□□□ -0.66
Upk2P38575 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.92□□□□□ -0.66
Upk2P38575 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.92□□□□□ -0.66
Upk2P38575 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.92□□□□□ -0.66
Upk2P38575 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.92□□□□□ -0.66
Upk2P38575 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Upk2P38575 Gm8227-201ENSMUST00000223306 571 ntBASIC10.92□□□□□ -0.66
Upk2P38575 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.92□□□□□ -0.66
Upk2P38575 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Upk2P38575 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Upk2P38575 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Upk2P38575 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Upk2P38575 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk2P38575 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Upk2P38575 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.92□□□□□ -0.66
Upk2P38575 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk2P38575 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk2P38575 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Gm5187-201ENSMUST00000117317 991 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Gm9083-201ENSMUST00000120423 819 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Upk2P38575 Gm13316-201ENSMUST00000140537 691 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.91□□□□□ -0.66
Upk2P38575 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Gm27023-201ENSMUST00000182372 285 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.91□□□□□ -0.66
Upk2P38575 Gm44958-201ENSMUST00000203734 736 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk2P38575 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Upk2P38575 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Upk2P38575 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk2P38575 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.91□□□□□ -0.66
Upk2P38575 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms