Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm12196-201ENSMUST00000120954 262 ntBASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm7666-201ENSMUST00000146631 819 ntBASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm270-201ENSMUST00000223010 976 ntBASIC11.51□□□□□ -0.57
Sftpa1P35242 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sftpa1P35242 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.51□□□□□ -0.57
Sftpa1P35242 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Gm23596-201ENSMUST00000104304 132 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Gm15573-201ENSMUST00000119487 540 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.5□□□□□ -0.57
Sftpa1P35242 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Rmrp-201ENSMUST00000157463 271 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Mir7677-201ENSMUST00000184226 67 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Sftpa1P35242 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sftpa1P35242 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.5□□□□□ -0.57
Sftpa1P35242 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sftpa1P35242 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sftpa1P35242 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.49□□□□□ -0.57
Sftpa1P35242 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sftpa1P35242 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms