Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P01852 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.43□□□□□ -0.58
P01852 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.43□□□□□ -0.58
P01852 Gm8227-201ENSMUST00000223306 571 ntBASIC11.43□□□□□ -0.58
P01852 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.43□□□□□ -0.58
P01852 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.43□□□□□ -0.58
P01852 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01852 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
P01852 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P01852 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.42□□□□□ -0.58
P01852 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
P01852 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
P01852 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Gm15370-201ENSMUST00000117158 253 ntBASIC11.42□□□□□ -0.58
P01852 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.42□□□□□ -0.58
P01852 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.42□□□□□ -0.58
P01852 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.42□□□□□ -0.58
P01852 Gm8018-201ENSMUST00000173536 789 ntBASIC11.42□□□□□ -0.58
P01852 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.42□□□□□ -0.58
P01852 Gm3961-201ENSMUST00000204425 994 ntBASIC11.42□□□□□ -0.58
P01852 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.42□□□□□ -0.58
P01852 Morn2-202ENSMUST00000227729 656 ntBASIC11.42□□□□□ -0.58
P01852 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
P01852 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P01852 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P01852 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
P01852 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.42□□□□□ -0.58
P01852 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
P01852 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.42□□□□□ -0.58
P01852 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01852 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
P01852 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
P01852 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.41□□□□□ -0.58
P01852 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
P01852 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P01852 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P01852 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P01852 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P01852 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P01852 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P01852 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
P01852 Gm11964-201ENSMUST00000120982 444 ntBASIC11.41□□□□□ -0.58
P01852 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.41□□□□□ -0.58
P01852 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Gm27516-201ENSMUST00000184237 98 ntBASIC11.41□□□□□ -0.58
P01852 Mir8109-201ENSMUST00000184375 117 ntBASIC11.41□□□□□ -0.58
P01852 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
P01852 Gm44405-201ENSMUST00000198952 126 ntBASIC11.41□□□□□ -0.58
P01852 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.41□□□□□ -0.58
P01852 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms