Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm14665-201ENSMUST00000122294 557 ntBASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm27438-201ENSMUST00000183480 110 ntBASIC13.7□□□□□ -0.22
Trdmt1O55055 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm8285-201ENSMUST00000208293 759 ntBASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm44551-201ENSMUST00000208804 171 ntBASIC13.7□□□□□ -0.22
Trdmt1O55055 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm10179-201ENSMUST00000086233 688 ntBASIC13.7□□□□□ -0.22
Trdmt1O55055 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.7□□□□□ -0.22
Trdmt1O55055 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.7□□□□□ -0.22
Trdmt1O55055 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm7722-201ENSMUST00000120646 741 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm23085-201ENSMUST00000157849 293 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Rprl1-201ENSMUST00000158050 327 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm4607-201ENSMUST00000206649 577 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Ginm1-202ENSMUST00000065124 300 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm26035-201ENSMUST00000083065 308 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.69□□□□□ -0.22
Trdmt1O55055 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trdmt1O55055 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trdmt1O55055 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.68□□□□□ -0.22
Trdmt1O55055 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trdmt1O55055 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.68□□□□□ -0.22
Trdmt1O55055 Matn2-206ENSMUST00000228570 2798 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trdmt1O55055 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.68□□□□□ -0.22
Trdmt1O55055 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.68□□□□□ -0.22
Trdmt1O55055 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trdmt1O55055 Gm11667-201ENSMUST00000119828 486 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms