Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Hdac1O09106 Gm13492-201ENSMUST00000119772 665 ntBASIC14.8□□□□□ -0.04
Hdac1O09106 Mir1894-201ENSMUST00000122802 81 ntBASIC14.8□□□□□ -0.04
Hdac1O09106 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Gm8018-201ENSMUST00000173536 789 ntBASIC14.8□□□□□ -0.04
Hdac1O09106 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.8□□□□□ -0.04
Hdac1O09106 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hdac1O09106 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.8□□□□□ -0.04
Hdac1O09106 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hdac1O09106 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hdac1O09106 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hdac1O09106 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.8□□□□□ -0.04
Hdac1O09106 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hdac1O09106 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hdac1O09106 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Hdac1O09106 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Gm11814-201ENSMUST00000119515 929 ntBASIC14.79□□□□□ -0.04
Hdac1O09106 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.79□□□□□ -0.04
Hdac1O09106 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Hdac1O09106 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.79□□□□□ -0.04
Hdac1O09106 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.79□□□□□ -0.04
Hdac1O09106 Gm8515-201ENSMUST00000194852 576 ntBASIC14.79□□□□□ -0.04
Hdac1O09106 Gm9908-201ENSMUST00000211534 448 ntBASIC14.79□□□□□ -0.04
Hdac1O09106 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.79□□□□□ -0.04
Hdac1O09106 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Hdac1O09106 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Hdac1O09106 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hdac1O09106 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Hdac1O09106 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.78□□□□□ -0.04
Hdac1O09106 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Hdac1O09106 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Hdac1O09106 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Gm9083-201ENSMUST00000120423 819 ntBASIC14.78□□□□□ -0.04
Hdac1O09106 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.78□□□□□ -0.04
Hdac1O09106 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.78□□□□□ -0.04
Hdac1O09106 Gm23984-201ENSMUST00000157139 203 ntBASIC14.78□□□□□ -0.04
Hdac1O09106 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.78□□□□□ -0.04
Hdac1O09106 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.78□□□□□ -0.04
Hdac1O09106 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.78□□□□□ -0.04
Hdac1O09106 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.78□□□□□ -0.04
Hdac1O09106 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.78□□□□□ -0.04
Hdac1O09106 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Hdac1O09106 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.78□□□□□ -0.04
Hdac1O09106 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hdac1O09106 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac1O09106 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.77□□□□□ -0.04
Hdac1O09106 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac1O09106 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.77□□□□□ -0.04
Hdac1O09106 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac1O09106 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hdac1O09106 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms