Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Gm25214-201ENSMUST00000104573 129 ntBASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Mir8109-201ENSMUST00000184375 117 ntBASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Gm42937-201ENSMUST00000197360 752 ntBASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cpsf4lE9Q2N0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm12241-201ENSMUST00000118330 726 ntBASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm6621-201ENSMUST00000193251 772 ntBASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm6334-201ENSMUST00000207083 228 ntBASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm9368-201ENSMUST00000219348 831 ntBASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cpsf4lE9Q2N0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms