Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.16□□□□□ -0.62
Trem1Q9JKE2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Mir874-201ENSMUST00000104769 76 ntBASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Gm11779-201ENSMUST00000118541 368 ntBASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trem1Q9JKE2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.15□□□□□ -0.63
Trem1Q9JKE2 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.15□□□□□ -0.63
Trem1Q9JKE2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trem1Q9JKE2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trem1Q9JKE2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trem1Q9JKE2 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trem1Q9JKE2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trem1Q9JKE2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trem1Q9JKE2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms