Protein–RNA interactions for Protein: Q922Y2

Trim59, Tripartite motif-containing protein 59, mousemouse

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim59Q922Y2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.26□□□□□ -0.13
Trim59Q922Y2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Mir1247-201ENSMUST00000116706 82 ntBASIC14.26□□□□□ -0.13
Trim59Q922Y2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Gm43133-201ENSMUST00000197472 463 ntBASIC14.26□□□□□ -0.13
Trim59Q922Y2 Gm35960-201ENSMUST00000202712 767 ntBASIC14.26□□□□□ -0.13
Trim59Q922Y2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.26□□□□□ -0.13
Trim59Q922Y2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Trim59Q922Y2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.26□□□□□ -0.13
Trim59Q922Y2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim59Q922Y2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.25□□□□□ -0.13
Trim59Q922Y2 Gm13570-201ENSMUST00000140763 309 ntBASIC14.25□□□□□ -0.13
Trim59Q922Y2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Gm37424-201ENSMUST00000191727 561 ntBASIC14.25□□□□□ -0.13
Trim59Q922Y2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Gm38002-201ENSMUST00000193255 180 ntBASIC14.25□□□□□ -0.13
Trim59Q922Y2 Gm43433-201ENSMUST00000196573 481 ntBASIC14.25□□□□□ -0.13
Trim59Q922Y2 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.25□□□□□ -0.13
Trim59Q922Y2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.25□□□□□ -0.13
Trim59Q922Y2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.25□□□□□ -0.13
Trim59Q922Y2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim59Q922Y2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Gm37201-201ENSMUST00000191845 523 ntBASIC14.24□□□□□ -0.13
Trim59Q922Y2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.24□□□□□ -0.13
Trim59Q922Y2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Trim59Q922Y2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim59Q922Y2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms