Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Mir1247-201ENSMUST00000116706 82 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm23119-201ENSMUST00000158610 140 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm27390-201ENSMUST00000184516 176 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gm43630-201ENSMUST00000201550 776 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb1Q91Y08 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Mir6420-201ENSMUST00000185032 102 ntBASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb1Q91Y08 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb1Q91Y08 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Pcdhb1Q91Y08 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb1Q91Y08 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb1Q91Y08 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb1Q91Y08 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pcdhb1Q91Y08 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pcdhb1Q91Y08 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb1Q91Y08 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Pcdhb1Q91Y08 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms