Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps39Q8R5L3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Matn2-203ENSMUST00000226766 3252 ntBASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps39Q8R5L3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Gm43818-201ENSMUST00000200605 466 ntBASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Gm7653-201ENSMUST00000214567 508 ntBASIC12.49□□□□□ -0.41
Vps39Q8R5L3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps39Q8R5L3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vps39Q8R5L3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms